Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.86□□□□□ -0.03
Smc3Q9CW03 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Gm23363-201ENSMUST00000175024 79 ntBASIC14.86□□□□□ -0.03
Smc3Q9CW03 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gm23984-201ENSMUST00000157139 203 ntBASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gm26185-201ENSMUST00000157692 266 ntBASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gm17208-201ENSMUST00000168388 535 ntBASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gm8810-201ENSMUST00000172895 754 ntBASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gm22121-201ENSMUST00000175148 54 ntBASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.85□□□□□ -0.03
Smc3Q9CW03 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smc3Q9CW03 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm13369-201ENSMUST00000119442 987 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm11803-201ENSMUST00000119966 444 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm8515-201ENSMUST00000194852 576 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm8099-201ENSMUST00000200510 742 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm45384-201ENSMUST00000210451 277 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm6180-201ENSMUST00000065243 498 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.84□□□□□ -0.03
Smc3Q9CW03 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.84□□□□□ -0.03
Smc3Q9CW03 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms