Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm27243-201ENSMUST00000183964 521 ntBASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm27516-201ENSMUST00000184237 98 ntBASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm43118-201ENSMUST00000199149 775 ntBASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm16372-201ENSMUST00000073088 450 ntBASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smc1aQ9CU62 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm12403-201ENSMUST00000121384 959 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm26927-201ENSMUST00000182385 965 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm37497-201ENSMUST00000195830 798 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Gm45930-201ENSMUST00000221330 292 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc1aQ9CU62 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.16□□□□□ -0.14
Smc1aQ9CU62 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms