Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa3Q9CQ71 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa3Q9CQ71 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Gm13492-201ENSMUST00000119772 665 ntBASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpa3Q9CQ71 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Gm11591-201ENSMUST00000120063 702 ntBASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.38□□□□□ -0.27
Rpa3Q9CQ71 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Gm27514-201ENSMUST00000183692 110 ntBASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpa3Q9CQ71 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms