Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Gm24749-201ENSMUST00000157838 343 ntBASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.39□□□□□ -0.75
Prpf8Q99PV0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.39□□□□□ -0.75
Prpf8Q99PV0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Prpf8Q99PV0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.38□□□□□ -0.75
Prpf8Q99PV0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm23363-201ENSMUST00000175024 79 ntBASIC10.38□□□□□ -0.75
Prpf8Q99PV0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm45224-201ENSMUST00000208203 414 ntBASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm12208-201ENSMUST00000122004 163 ntBASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Prpf8Q99PV0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.37□□□□□ -0.75
Prpf8Q99PV0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Gm43378-201ENSMUST00000199336 582 ntBASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Gm5904-201ENSMUST00000210286 865 ntBASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.37□□□□□ -0.75
Prpf8Q99PV0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms