Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm24791-201ENSMUST00000104284 131 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm14193-201ENSMUST00000105067 153 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm26368-201ENSMUST00000157826 118 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh23Q99PF4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Gm17070-201ENSMUST00000170463 784 ntBASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Gm45310-201ENSMUST00000210436 275 ntBASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh23Q99PF4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Gm8731-201ENSMUST00000118088 412 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Mir326-201ENSMUST00000083637 95 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh23Q99PF4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Gm5870-201ENSMUST00000196461 282 ntBASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms