Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm11803-201ENSMUST00000119966 444 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm8810-201ENSMUST00000172895 754 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm24196-201ENSMUST00000179161 110 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm8652-201ENSMUST00000181363 964 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm28693-202ENSMUST00000190758 331 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Mir686-201ENSMUST00000102174 109 ntBASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga3Q91XY5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms