Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.53□□□□□ -0.4
Vsx1Q91V10 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gm13408-201ENSMUST00000119822 798 ntBASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gm13935-201ENSMUST00000121859 798 ntBASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.53□□□□□ -0.4
Vsx1Q91V10 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.53□□□□□ -0.4
Vsx1Q91V10 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.53□□□□□ -0.4
Vsx1Q91V10 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.53□□□□□ -0.4
Vsx1Q91V10 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vsx1Q91V10 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Vsx1Q91V10 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vsx1Q91V10 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Gm37666-201ENSMUST00000194110 866 ntBASIC12.52□□□□□ -0.41
Vsx1Q91V10 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.52□□□□□ -0.41
Vsx1Q91V10 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.52□□□□□ -0.41
Vsx1Q91V10 Gm18730-201ENSMUST00000218038 343 ntBASIC12.52□□□□□ -0.41
Vsx1Q91V10 Gm10752-201ENSMUST00000218348 729 ntBASIC12.52□□□□□ -0.41
Vsx1Q91V10 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.52□□□□□ -0.41
Vsx1Q91V10 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms