Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Gm7809-201ENSMUST00000153199 742 ntBASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Gm9396-201ENSMUST00000076703 567 ntBASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Top1mtQ8R4U6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Gm11964-201ENSMUST00000120982 444 ntBASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Top1mtQ8R4U6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Gm8738-201ENSMUST00000172606 329 ntBASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Gm3890-201ENSMUST00000182416 207 ntBASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Top1mtQ8R4U6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 162.4 ms