Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Gm44069-201ENSMUST00000204898 506 ntBASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Gm7730-201ENSMUST00000212486 454 ntBASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Itm2b-204ENSMUST00000228637 783 ntBASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nudcd3Q8R1N4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Gm24694-201ENSMUST00000180054 110 ntBASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Gm27663-201ENSMUST00000184839 110 ntBASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nudcd3Q8R1N4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Cog3-203ENSMUST00000227473 4197 ntBASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms