Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Gm43118-201ENSMUST00000199149 775 ntBASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sf3a1Q8K4Z5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Daam2-202ENSMUST00000224595 1926 ntBASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.49■□□□□ 0.07
Sf3a1Q8K4Z5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Gm6023-201ENSMUST00000118217 606 ntBASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Gm9899-201ENSMUST00000065519 555 ntBASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sf3a1Q8K4Z5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Gm11793-201ENSMUST00000120433 981 ntBASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.47■□□□□ 0.07
Sf3a1Q8K4Z5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms