Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cchcr1Q8K2I2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Gm4271-201ENSMUST00000174444 973 ntBASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.97□□□□□ -0.01
Cchcr1Q8K2I2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm22331-201ENSMUST00000158066 136 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm16296-201ENSMUST00000159905 325 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm27331-201ENSMUST00000183705 60 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm29705-201ENSMUST00000212598 474 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm19163-201ENSMUST00000223313 780 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cchcr1Q8K2I2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cchcr1Q8K2I2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cchcr1Q8K2I2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cchcr1Q8K2I2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cchcr1Q8K2I2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Gm14760-201ENSMUST00000121831 999 ntBASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cchcr1Q8K2I2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms