Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.95□□□□□ -0.34
CopaQ8CIE6 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.95□□□□□ -0.34
CopaQ8CIE6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.95□□□□□ -0.34
CopaQ8CIE6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.95□□□□□ -0.34
CopaQ8CIE6 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.95□□□□□ -0.34
CopaQ8CIE6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.95□□□□□ -0.34
CopaQ8CIE6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CopaQ8CIE6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Gm11793-201ENSMUST00000120433 981 ntBASIC12.94□□□□□ -0.34
CopaQ8CIE6 Gm16479-201ENSMUST00000121706 932 ntBASIC12.94□□□□□ -0.34
CopaQ8CIE6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Gm6222-202ENSMUST00000182143 629 ntBASIC12.94□□□□□ -0.34
CopaQ8CIE6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.94□□□□□ -0.34
CopaQ8CIE6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopaQ8CIE6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.93□□□□□ -0.34
CopaQ8CIE6 Gm42627-201ENSMUST00000197347 224 ntBASIC12.93□□□□□ -0.34
CopaQ8CIE6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.93□□□□□ -0.34
CopaQ8CIE6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms