Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc5Q8CG46 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.62■□□□□ 0.09
Smc5Q8CG46 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
Smc5Q8CG46 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.61■□□□□ 0.09
Smc5Q8CG46 Gm26185-201ENSMUST00000157692 266 ntBASIC15.61■□□□□ 0.09
Smc5Q8CG46 Gm24196-201ENSMUST00000179161 110 ntBASIC15.61■□□□□ 0.09
Smc5Q8CG46 Mir6977-201ENSMUST00000184960 64 ntBASIC15.61■□□□□ 0.09
Smc5Q8CG46 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Gm18018-201ENSMUST00000198273 408 ntBASIC15.61■□□□□ 0.09
Smc5Q8CG46 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Gm10146-201ENSMUST00000072739 309 ntBASIC15.61■□□□□ 0.09
Smc5Q8CG46 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Smc5Q8CG46 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.6■□□□□ 0.09
Smc5Q8CG46 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Gm11964-201ENSMUST00000120982 444 ntBASIC15.6■□□□□ 0.09
Smc5Q8CG46 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.6■□□□□ 0.09
Smc5Q8CG46 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.6■□□□□ 0.09
Smc5Q8CG46 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smc5Q8CG46 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.59■□□□□ 0.09
Smc5Q8CG46 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.59■□□□□ 0.09
Smc5Q8CG46 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms