Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc28bQ8CEG5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.53□□□□□ -0.4
Ccdc28bQ8CEG5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc28bQ8CEG5 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc28bQ8CEG5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28bQ8CEG5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28bQ8CEG5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc28bQ8CEG5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28bQ8CEG5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28bQ8CEG5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Gm38223-201ENSMUST00000194484 695 ntBASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.51□□□□□ -0.41
Ccdc28bQ8CEG5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Gm2213-201ENSMUST00000197485 688 ntBASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms