Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vcpip1Q8CDG3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Gm8805-201ENSMUST00000117848 313 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Gm14921-201ENSMUST00000118643 908 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Gm11803-201ENSMUST00000119966 444 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Gm24196-201ENSMUST00000179161 110 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Gm37497-201ENSMUST00000195830 798 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Gm26035-201ENSMUST00000083065 308 ntBASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcpip1Q8CDG3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm8810-201ENSMUST00000172895 754 ntBASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcpip1Q8CDG3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vcpip1Q8CDG3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Gm13392-201ENSMUST00000117708 150 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms