Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Gm1335-201ENSMUST00000121653 386 ntBASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Gm7029-201ENSMUST00000173226 450 ntBASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.29□□□□□ -0.44
Cpsf4Q8BQZ5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Gm12384-201ENSMUST00000119228 919 ntBASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Gm37424-201ENSMUST00000191727 561 ntBASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Gm6458-201ENSMUST00000211573 635 ntBASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4Q8BQZ5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4Q8BQZ5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Gm11978-201ENSMUST00000122315 466 ntBASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Gm8062-201ENSMUST00000139696 444 ntBASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Snora78-201ENSMUST00000158630 128 ntBASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Gm43630-201ENSMUST00000201550 776 ntBASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms