Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm11663-201ENSMUST00000117888 290 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm8815-201ENSMUST00000173809 620 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm21092-201ENSMUST00000178995 955 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm38117-201ENSMUST00000194653 939 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Gm34023-201ENSMUST00000195539 217 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 AC112945.1-201ENSMUST00000226413 514 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 AC099645.1-201ENSMUST00000226476 1105 ntBASIC17.66■□□□□ 0.42
Usp54Q8BL06 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp54Q8BL06 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.65■□□□□ 0.42
Usp54Q8BL06 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp54Q8BL06 Gm45643-201ENSMUST00000211364 1484 ntBASIC17.65■□□□□ 0.42
Usp54Q8BL06 Gm15566-201ENSMUST00000121130 590 ntBASIC17.65■□□□□ 0.42
Usp54Q8BL06 Mir1901-201ENSMUST00000122616 78 ntBASIC17.65■□□□□ 0.42
Usp54Q8BL06 Gm23045-201ENSMUST00000175041 96 ntBASIC17.65■□□□□ 0.42
Usp54Q8BL06 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp54Q8BL06 AC173482.6-201ENSMUST00000225889 1741 ntBASIC17.65■□□□□ 0.42
Usp54Q8BL06 Gm13910-201ENSMUST00000121752 1428 ntBASIC17.64■□□□□ 0.42
Usp54Q8BL06 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Usp54Q8BL06 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp54Q8BL06 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Gm18782-201ENSMUST00000209023 1399 ntBASIC17.64■□□□□ 0.41
Usp54Q8BL06 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Gm11451-201ENSMUST00000118946 630 ntBASIC17.64■□□□□ 0.41
Usp54Q8BL06 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Gm44882-201ENSMUST00000205702 802 ntBASIC17.64■□□□□ 0.41
Usp54Q8BL06 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp54Q8BL06 AC126262.1-201ENSMUST00000221802 1904 ntBASIC17.63■□□□□ 0.41
Usp54Q8BL06 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Gm12856-201ENSMUST00000119471 1293 ntBASIC17.63■□□□□ 0.41
Usp54Q8BL06 Gm15725-201ENSMUST00000119947 1090 ntBASIC17.63■□□□□ 0.41
Usp54Q8BL06 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC17.63■□□□□ 0.41
Usp54Q8BL06 Gm12407-201ENSMUST00000180219 324 ntBASIC17.63■□□□□ 0.41
Usp54Q8BL06 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Gm4735-201ENSMUST00000138679 1302 ntBASIC17.63■□□□□ 0.41
Usp54Q8BL06 Gm5855-201ENSMUST00000200240 1305 ntBASIC17.63■□□□□ 0.41
Usp54Q8BL06 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms