Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Chmp2bQ8BJF9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Gm12928-201ENSMUST00000117115 573 ntBASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chmp2bQ8BJF9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Chmp2bQ8BJF9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp2bQ8BJF9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp2bQ8BJF9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp2bQ8BJF9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp2bQ8BJF9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp2bQ8BJF9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp2bQ8BJF9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp2bQ8BJF9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Gm7488-201ENSMUST00000117148 684 ntBASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Gm15823-201ENSMUST00000064305 670 ntBASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp2bQ8BJF9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms