Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm18473-201ENSMUST00000220543 868 ntBASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf38Q8BI21 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm28911-201ENSMUST00000188837 117 ntBASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm9794-201ENSMUST00000202370 423 ntBASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm8598-201ENSMUST00000221184 836 ntBASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm26035-201ENSMUST00000083065 308 ntBASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf38Q8BI21 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm11918-201ENSMUST00000121660 179 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm13123-201ENSMUST00000122173 492 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm8463-201ENSMUST00000208573 613 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Gm45384-201ENSMUST00000210451 277 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf38Q8BI21 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms