Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Exosc3Q7TQK4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm13392-201ENSMUST00000117708 150 ntBASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm27572-201ENSMUST00000183702 255 ntBASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm18054-201ENSMUST00000207539 555 ntBASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm45930-201ENSMUST00000221330 292 ntBASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm26035-201ENSMUST00000083065 308 ntBASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm10478-201ENSMUST00000084451 396 ntBASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Exosc3Q7TQK4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Exosc3Q7TQK4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.65□□□□□ -0.55
Exosc3Q7TQK4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Exosc3Q7TQK4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Exosc3Q7TQK4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Exosc3Q7TQK4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Exosc3Q7TQK4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Gm8018-201ENSMUST00000173536 789 ntBASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Gm45925-201ENSMUST00000218882 744 ntBASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Exosc3Q7TQK4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Exosc3Q7TQK4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Exosc3Q7TQK4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Exosc3Q7TQK4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Exosc3Q7TQK4 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms