Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Gm37859-201ENSMUST00000195529 2173 ntBASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC21.62■■□□□ 1.05
Smarca2Q6DIC0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm26013-201ENSMUST00000104404 119 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm12218-201ENSMUST00000117666 399 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm11422-201ENSMUST00000118925 1103 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm8531-201ENSMUST00000188319 893 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm42779-201ENSMUST00000198807 406 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm11470-201ENSMUST00000118868 1475 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm15036-201ENSMUST00000118880 400 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm13022-201ENSMUST00000121181 285 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm17798-201ENSMUST00000182282 1035 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm4654-201ENSMUST00000183305 982 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm29410-201ENSMUST00000188383 694 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm44421-201ENSMUST00000205064 1221 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Gm8894-201ENSMUST00000074642 666 ntBASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarca2Q6DIC0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Gm6903-201ENSMUST00000160509 1366 ntBASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Gm42863-201ENSMUST00000197875 2958 ntBASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 n-R5s84-201ENSMUST00000122591 109 ntBASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Gm43778-201ENSMUST00000199438 199 ntBASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarca2Q6DIC0 Gm18198-201ENSMUST00000204986 1551 ntBASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Gm8038-201ENSMUST00000164674 2044 ntBASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarca2Q6DIC0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Gm15207-201ENSMUST00000119259 442 ntBASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC21.58■■□□□ 1.05
Smarca2Q6DIC0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.04
Smarca2Q6DIC0 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC21.58■■□□□ 1.04
Smarca2Q6DIC0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Smarca2Q6DIC0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smarca2Q6DIC0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Smarca2Q6DIC0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Smarca2Q6DIC0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC21.58■■□□□ 1.04
Smarca2Q6DIC0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC21.57■■□□□ 1.04
Smarca2Q6DIC0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smarca2Q6DIC0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarca2Q6DIC0 Gm23912-201ENSMUST00000104687 87 ntBASIC21.57■■□□□ 1.04
Smarca2Q6DIC0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms