Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gli3Q61602 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gli3Q61602 Gm13171-201ENSMUST00000117233 391 ntBASIC16.6■□□□□ 0.25
Gli3Q61602 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Gli3Q61602 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gli3Q61602 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC16.6■□□□□ 0.25
Gli3Q61602 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gli3Q61602 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gli3Q61602 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gli3Q61602 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gli3Q61602 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.59■□□□□ 0.25
Gli3Q61602 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Gli3Q61602 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gli3Q61602 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Gli3Q61602 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gli3Q61602 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC16.59■□□□□ 0.25
Gli3Q61602 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Gm16305-201ENSMUST00000140747 556 ntBASIC16.59■□□□□ 0.25
Gli3Q61602 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC16.59■□□□□ 0.25
Gli3Q61602 Gm43671-201ENSMUST00000200422 433 ntBASIC16.59■□□□□ 0.25
Gli3Q61602 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC16.59■□□□□ 0.25
Gli3Q61602 Rps3a2-201ENSMUST00000074245 792 ntBASIC16.59■□□□□ 0.25
Gli3Q61602 Rps3a3-201ENSMUST00000074680 795 ntBASIC16.59■□□□□ 0.25
Gli3Q61602 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gli3Q61602 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
Gli3Q61602 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Gli3Q61602 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC16.58■□□□□ 0.25
Gli3Q61602 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Gli3Q61602 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Gli3Q61602 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.58■□□□□ 0.24
Gli3Q61602 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Gli3Q61602 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
Gli3Q61602 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC16.58■□□□□ 0.24
Gli3Q61602 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC16.58■□□□□ 0.24
Gli3Q61602 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC16.58■□□□□ 0.24
Gli3Q61602 Gm9625-201ENSMUST00000180422 955 ntBASIC16.58■□□□□ 0.24
Gli3Q61602 Gm9162-201ENSMUST00000182081 991 ntBASIC16.58■□□□□ 0.24
Gli3Q61602 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC16.58■□□□□ 0.24
Gli3Q61602 Gm45113-201ENSMUST00000207518 165 ntBASIC16.58■□□□□ 0.24
Gli3Q61602 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC16.58■□□□□ 0.24
Gli3Q61602 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC16.58■□□□□ 0.24
Gli3Q61602 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Gli3Q61602 AC142266.1-201ENSMUST00000228107 415 ntBASIC16.58■□□□□ 0.24
Gli3Q61602 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gli3Q61602 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gli3Q61602 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.58■□□□□ 0.24
Gli3Q61602 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Gli3Q61602 Gm9081-201ENSMUST00000182346 991 ntBASIC16.57■□□□□ 0.24
Gli3Q61602 Gm18711-201ENSMUST00000199341 750 ntBASIC16.57■□□□□ 0.24
Gli3Q61602 Gm18123-201ENSMUST00000210874 822 ntBASIC16.57■□□□□ 0.24
Gli3Q61602 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 AC162932.1-201ENSMUST00000219209 872 ntBASIC16.57■□□□□ 0.24
Gli3Q61602 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Gli3Q61602 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gli3Q61602 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms