Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gm11637-201ENSMUST00000120601 592 ntBASIC12.35□□□□□ -0.43
Vsx2Q61412 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.35□□□□□ -0.43
Vsx2Q61412 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.35□□□□□ -0.43
Vsx2Q61412 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.35□□□□□ -0.43
Vsx2Q61412 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.35□□□□□ -0.43
Vsx2Q61412 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vsx2Q61412 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.35□□□□□ -0.43
Vsx2Q61412 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vsx2Q61412 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.34□□□□□ -0.43
Vsx2Q61412 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.34□□□□□ -0.43
Vsx2Q61412 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Gm17420-201ENSMUST00000164753 153 ntBASIC12.34□□□□□ -0.43
Vsx2Q61412 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Vsx2Q61412 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.34□□□□□ -0.43
Vsx2Q61412 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.34□□□□□ -0.43
Vsx2Q61412 Gm19163-201ENSMUST00000223313 780 ntBASIC12.34□□□□□ -0.43
Vsx2Q61412 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vsx2Q61412 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Vsx2Q61412 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.34□□□□□ -0.43
Vsx2Q61412 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.34□□□□□ -0.43
Vsx2Q61412 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.34□□□□□ -0.43
Vsx2Q61412 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Vsx2Q61412 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vsx2Q61412 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.34□□□□□ -0.43
Vsx2Q61412 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vsx2Q61412 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.33□□□□□ -0.43
Vsx2Q61412 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vsx2Q61412 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vsx2Q61412 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Vsx2Q61412 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.33□□□□□ -0.44
Vsx2Q61412 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms