Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.95□□□□□ -0.34
Slc6a4Q60857 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a4Q60857 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm15236-201ENSMUST00000117309 379 ntBASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm11930-201ENSMUST00000117788 190 ntBASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.94□□□□□ -0.34
Slc6a4Q60857 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a4Q60857 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm24830-201ENSMUST00000102024 166 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm12314-201ENSMUST00000118104 538 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm14832-201ENSMUST00000121289 322 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm13570-201ENSMUST00000140763 309 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Rmrp-201ENSMUST00000157463 271 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm25890-201ENSMUST00000177643 165 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm22614-201ENSMUST00000178300 165 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm8885-201ENSMUST00000189382 598 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm10076-201ENSMUST00000073238 384 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm22042-201ENSMUST00000082989 165 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm26232-201ENSMUST00000083360 166 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm24136-201ENSMUST00000083374 165 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm26110-201ENSMUST00000083971 165 ntBASIC12.93□□□□□ -0.34
Slc6a4Q60857 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms