Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Gm13492-201ENSMUST00000119772 665 ntBASIC15.07■□□□□ 0
Rnf20Q5DTM8 Gm15703-201ENSMUST00000120250 880 ntBASIC15.07■□□□□ 0
Rnf20Q5DTM8 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.07■□□□□ 0
Rnf20Q5DTM8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.07■□□□□ 0
Rnf20Q5DTM8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.07■□□□□ 0
Rnf20Q5DTM8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf20Q5DTM8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Gm12384-201ENSMUST00000119228 919 ntBASIC15.06■□□□□ 0
Rnf20Q5DTM8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Gm38092-201ENSMUST00000195600 653 ntBASIC15.06■□□□□ 0
Rnf20Q5DTM8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf20Q5DTM8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf20Q5DTM8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rnf20Q5DTM8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf20Q5DTM8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.05■□□□□ -0
Rnf20Q5DTM8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.05■□□□□ -0
Rnf20Q5DTM8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.05■□□□□ -0
Rnf20Q5DTM8 Gm6266-201ENSMUST00000203844 806 ntBASIC15.05■□□□□ -0
Rnf20Q5DTM8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.05■□□□□ -0
Rnf20Q5DTM8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf20Q5DTM8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms