Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.52□□□□□ -0.41
Scn2bQ56A07 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Gm8805-201ENSMUST00000117848 313 ntBASIC12.51□□□□□ -0.41
Scn2bQ56A07 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Gm8652-201ENSMUST00000181363 964 ntBASIC12.51□□□□□ -0.41
Scn2bQ56A07 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.51□□□□□ -0.41
Scn2bQ56A07 Mir339-201ENSMUST00000083659 96 ntBASIC12.51□□□□□ -0.41
Scn2bQ56A07 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.51□□□□□ -0.41
Scn2bQ56A07 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn2bQ56A07 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.5□□□□□ -0.41
Scn2bQ56A07 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Gm13123-201ENSMUST00000122173 492 ntBASIC12.5□□□□□ -0.41
Scn2bQ56A07 Gm17150-201ENSMUST00000165577 381 ntBASIC12.5□□□□□ -0.41
Scn2bQ56A07 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.5□□□□□ -0.41
Scn2bQ56A07 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.5□□□□□ -0.41
Scn2bQ56A07 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.5□□□□□ -0.41
Scn2bQ56A07 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Gm26035-201ENSMUST00000083065 308 ntBASIC12.5□□□□□ -0.41
Scn2bQ56A07 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.5□□□□□ -0.41
Scn2bQ56A07 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn2bQ56A07 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms