Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm44405-201ENSMUST00000198952 126 ntBASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nlrc4Q3UP24 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nlrc4Q3UP24 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nlrc4Q3UP24 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nlrc4Q3UP24 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.27
Nlrc4Q3UP24 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Gm15370-201ENSMUST00000117158 253 ntBASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Gm15198-201ENSMUST00000117283 177 ntBASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Gm13297-201ENSMUST00000120205 934 ntBASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nlrc4Q3UP24 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Gm11597-201ENSMUST00000121423 964 ntBASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Gm45925-201ENSMUST00000218882 744 ntBASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Morn2-202ENSMUST00000227729 656 ntBASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nlrc4Q3UP24 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms