Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Gm25700-201ENSMUST00000177693 110 ntBASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Gm3096-201ENSMUST00000185770 364 ntBASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc33Q3ULW6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc33Q3ULW6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm13611-201ENSMUST00000118269 318 ntBASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc33Q3ULW6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc33Q3ULW6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc33Q3ULW6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc33Q3ULW6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc33Q3ULW6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms