Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VcpQ01853 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.54□□□□□ -0.24
VcpQ01853 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VcpQ01853 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcpQ01853 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.54□□□□□ -0.24
VcpQ01853 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VcpQ01853 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VcpQ01853 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
VcpQ01853 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
VcpQ01853 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
VcpQ01853 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.53□□□□□ -0.24
VcpQ01853 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.53□□□□□ -0.24
VcpQ01853 Gm11439-201ENSMUST00000118598 409 ntBASIC13.53□□□□□ -0.24
VcpQ01853 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.53□□□□□ -0.24
VcpQ01853 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.53□□□□□ -0.24
VcpQ01853 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VcpQ01853 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VcpQ01853 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
VcpQ01853 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.52□□□□□ -0.24
VcpQ01853 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VcpQ01853 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VcpQ01853 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VcpQ01853 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VcpQ01853 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VcpQ01853 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
VcpQ01853 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VcpQ01853 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
VcpQ01853 Gm24830-201ENSMUST00000102024 166 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Gm8805-201ENSMUST00000117848 313 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.52□□□□□ -0.25
VcpQ01853 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
VcpQ01853 Gm25890-201ENSMUST00000177643 165 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Gm22614-201ENSMUST00000178300 165 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.52□□□□□ -0.25
VcpQ01853 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.52□□□□□ -0.25
VcpQ01853 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.52□□□□□ -0.25
VcpQ01853 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.52□□□□□ -0.25
VcpQ01853 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.52□□□□□ -0.25
VcpQ01853 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.52□□□□□ -0.25
VcpQ01853 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
VcpQ01853 Gm22042-201ENSMUST00000082989 165 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Gm26232-201ENSMUST00000083360 166 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Gm24136-201ENSMUST00000083374 165 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Gm26110-201ENSMUST00000083971 165 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
VcpQ01853 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
VcpQ01853 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VcpQ01853 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
VcpQ01853 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.52□□□□□ -0.25
VcpQ01853 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VcpQ01853 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms