Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thumpd3P97770 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.9□□□□□ -0.34
Thumpd3P97770 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.9□□□□□ -0.34
Thumpd3P97770 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.9□□□□□ -0.34
Thumpd3P97770 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Thumpd3P97770 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Thumpd3P97770 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Thumpd3P97770 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Thumpd3P97770 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.89□□□□□ -0.35
Thumpd3P97770 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Thumpd3P97770 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Thumpd3P97770 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Thumpd3P97770 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.89□□□□□ -0.35
Thumpd3P97770 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.89□□□□□ -0.35
Thumpd3P97770 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Gm43630-201ENSMUST00000201550 776 ntBASIC12.89□□□□□ -0.35
Thumpd3P97770 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.89□□□□□ -0.35
Thumpd3P97770 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.89□□□□□ -0.35
Thumpd3P97770 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.89□□□□□ -0.35
Thumpd3P97770 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.89□□□□□ -0.35
Thumpd3P97770 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.89□□□□□ -0.35
Thumpd3P97770 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thumpd3P97770 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Thumpd3P97770 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.88□□□□□ -0.35
Thumpd3P97770 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.88□□□□□ -0.35
Thumpd3P97770 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Thumpd3P97770 Gm6091-201ENSMUST00000098307 165 ntBASIC12.88□□□□□ -0.35
Thumpd3P97770 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.88□□□□□ -0.35
Thumpd3P97770 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thumpd3P97770 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.87□□□□□ -0.35
Thumpd3P97770 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.87□□□□□ -0.35
Thumpd3P97770 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd3P97770 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.87□□□□□ -0.35
Thumpd3P97770 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms