Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.99□□□□□ -0.49
Nkx3-2P97503 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.99□□□□□ -0.49
Nkx3-2P97503 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.99□□□□□ -0.49
Nkx3-2P97503 Gm38341-201ENSMUST00000195357 515 ntBASIC11.99□□□□□ -0.49
Nkx3-2P97503 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.99□□□□□ -0.49
Nkx3-2P97503 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.99□□□□□ -0.49
Nkx3-2P97503 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.98□□□□□ -0.49
Nkx3-2P97503 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gm14921-201ENSMUST00000118643 908 ntBASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gm13350-201ENSMUST00000120519 479 ntBASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gm11964-201ENSMUST00000120982 444 ntBASIC11.98□□□□□ -0.49
Nkx3-2P97503 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gm37489-201ENSMUST00000191883 159 ntBASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Morn2-202ENSMUST00000227729 656 ntBASIC11.98□□□□□ -0.49
Nkx3-2P97503 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.98□□□□□ -0.49
Nkx3-2P97503 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx3-2P97503 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.97□□□□□ -0.49
Nkx3-2P97503 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.97□□□□□ -0.49
Nkx3-2P97503 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx3-2P97503 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms