Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lig3P97386 Gm11618-201ENSMUST00000117946 267 ntBASIC13.86□□□□□ -0.19
Lig3P97386 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.86□□□□□ -0.19
Lig3P97386 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.86□□□□□ -0.19
Lig3P97386 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.86□□□□□ -0.19
Lig3P97386 Mospd4-201ENSMUST00000180618 576 ntBASIC13.86□□□□□ -0.19
Lig3P97386 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.86□□□□□ -0.19
Lig3P97386 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.86□□□□□ -0.19
Lig3P97386 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.86□□□□□ -0.19
Lig3P97386 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Lig3P97386 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lig3P97386 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lig3P97386 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Lig3P97386 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lig3P97386 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lig3P97386 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Lig3P97386 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Lig3P97386 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.85□□□□□ -0.19
Lig3P97386 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm29608-201ENSMUST00000190444 463 ntBASIC13.85□□□□□ -0.19
Lig3P97386 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.85□□□□□ -0.19
Lig3P97386 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.85□□□□□ -0.19
Lig3P97386 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lig3P97386 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lig3P97386 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lig3P97386 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lig3P97386 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lig3P97386 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lig3P97386 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lig3P97386 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.84□□□□□ -0.19
Lig3P97386 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lig3P97386 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lig3P97386 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.84□□□□□ -0.19
Lig3P97386 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Gm14017-201ENSMUST00000121934 386 ntBASIC13.84□□□□□ -0.19
Lig3P97386 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Gm24990-201ENSMUST00000157406 323 ntBASIC13.84□□□□□ -0.19
Lig3P97386 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.84□□□□□ -0.19
Lig3P97386 Gm24514-201ENSMUST00000174961 285 ntBASIC13.84□□□□□ -0.19
Lig3P97386 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lig3P97386 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lig3P97386 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.84□□□□□ -0.19
Lig3P97386 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.84□□□□□ -0.19
Lig3P97386 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.84□□□□□ -0.19
Lig3P97386 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms