Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim43bP86448 Gm24196-201ENSMUST00000179161 110 ntBASIC13.05□□□□□ -0.32
Trim43bP86448 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 AY702102-202ENSMUST00000194651 1173 ntBASIC13.05□□□□□ -0.32
Trim43bP86448 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim43bP86448 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim43bP86448 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.05□□□□□ -0.32
Trim43bP86448 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43bP86448 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim43bP86448 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Gm12390-201ENSMUST00000117897 397 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim43bP86448 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.04□□□□□ -0.32
Trim43bP86448 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim43bP86448 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trim43bP86448 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim43bP86448 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim43bP86448 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43bP86448 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim43bP86448 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.03□□□□□ -0.32
Trim43bP86448 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim43bP86448 Mir1982-201ENSMUST00000157368 74 ntBASIC13.03□□□□□ -0.32
Trim43bP86448 Gm8652-201ENSMUST00000181363 964 ntBASIC13.03□□□□□ -0.32
Trim43bP86448 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim43bP86448 Gm7561-201ENSMUST00000211203 886 ntBASIC13.03□□□□□ -0.32
Trim43bP86448 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.03□□□□□ -0.32
Trim43bP86448 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim43bP86448 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim43bP86448 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim43bP86448 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43bP86448 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim43bP86448 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trim43bP86448 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.03□□□□□ -0.32
Trim43bP86448 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43bP86448 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim43bP86448 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43bP86448 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim43bP86448 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms