Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.32□□□□□ -0.6
SgcbP82349 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
SgcbP82349 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
SgcbP82349 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcbP82349 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.31□□□□□ -0.6
SgcbP82349 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SgcbP82349 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcbP82349 Snord83b-201ENSMUST00000104546 94 ntBASIC11.31□□□□□ -0.6
SgcbP82349 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.31□□□□□ -0.6
SgcbP82349 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.31□□□□□ -0.6
SgcbP82349 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.31□□□□□ -0.6
SgcbP82349 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SgcbP82349 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcbP82349 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SgcbP82349 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.31□□□□□ -0.6
SgcbP82349 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.31□□□□□ -0.6
SgcbP82349 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.31□□□□□ -0.6
SgcbP82349 Gm10608-202ENSMUST00000213924 676 ntBASIC11.31□□□□□ -0.6
SgcbP82349 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.31□□□□□ -0.6
SgcbP82349 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.31□□□□□ -0.6
SgcbP82349 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.31□□□□□ -0.6
SgcbP82349 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.31□□□□□ -0.6
SgcbP82349 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.31□□□□□ -0.6
SgcbP82349 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SgcbP82349 Gm24526-201ENSMUST00000082921 158 ntBASIC11.31□□□□□ -0.6
SgcbP82349 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SgcbP82349 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SgcbP82349 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SgcbP82349 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SgcbP82349 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SgcbP82349 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.3□□□□□ -0.6
SgcbP82349 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SgcbP82349 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.3□□□□□ -0.6
SgcbP82349 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Gm10434-201ENSMUST00000101158 471 ntBASIC11.3□□□□□ -0.6
SgcbP82349 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SgcbP82349 Mir1247-201ENSMUST00000116706 82 ntBASIC11.3□□□□□ -0.6
SgcbP82349 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.3□□□□□ -0.6
SgcbP82349 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms