Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.48□□□□□ -0.41
Shox2P70390 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Gm15376-201ENSMUST00000122258 783 ntBASIC12.48□□□□□ -0.41
Shox2P70390 Mir1895-201ENSMUST00000122615 79 ntBASIC12.48□□□□□ -0.41
Shox2P70390 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.48□□□□□ -0.41
Shox2P70390 Gm27622-201ENSMUST00000183779 60 ntBASIC12.48□□□□□ -0.41
Shox2P70390 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Mir339-201ENSMUST00000083659 96 ntBASIC12.48□□□□□ -0.41
Shox2P70390 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Shox2P70390 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Shox2P70390 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Shox2P70390 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shox2P70390 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.47□□□□□ -0.41
Shox2P70390 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Shox2P70390 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.47□□□□□ -0.41
Shox2P70390 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.47□□□□□ -0.41
Shox2P70390 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.47□□□□□ -0.41
Shox2P70390 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Shox2P70390 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Shox2P70390 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Shox2P70390 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Shox2P70390 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.47□□□□□ -0.41
Shox2P70390 Mzt1-203ENSMUST00000227948 952 ntBASIC12.47□□□□□ -0.41
Shox2P70390 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.47□□□□□ -0.41
Shox2P70390 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Shox2P70390 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shox2P70390 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.46□□□□□ -0.41
Shox2P70390 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.46□□□□□ -0.41
Shox2P70390 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Gm6415-201ENSMUST00000118488 348 ntBASIC12.46□□□□□ -0.41
Shox2P70390 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Shox2P70390 Gm43094-201ENSMUST00000196549 921 ntBASIC12.46□□□□□ -0.41
Shox2P70390 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
Shox2P70390 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Shox2P70390 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shox2P70390 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Shox2P70390 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Shox2P70390 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shox2P70390 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shox2P70390 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shox2P70390 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shox2P70390 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.46□□□□□ -0.42
Shox2P70390 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Shox2P70390 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.45□□□□□ -0.42
Shox2P70390 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Shox2P70390 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms