Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.07□□□□□ -0.32
Smad1P70340 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smad1P70340 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.06□□□□□ -0.32
Smad1P70340 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Smad1P70340 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Smad1P70340 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Smad1P70340 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.06□□□□□ -0.32
Smad1P70340 Gm13350-201ENSMUST00000120519 479 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Gm27331-201ENSMUST00000183705 60 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Gm4857-201ENSMUST00000192718 785 ntBASIC13.06□□□□□ -0.32
Smad1P70340 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm38002-201ENSMUST00000193255 180 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.06□□□□□ -0.32
Smad1P70340 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm18056-201ENSMUST00000207670 568 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm18061-201ENSMUST00000208350 562 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm18063-201ENSMUST00000208529 568 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm18052-201ENSMUST00000208750 559 ntBASIC13.06□□□□□ -0.32
Smad1P70340 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Gm8598-201ENSMUST00000221184 836 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smad1P70340 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.06□□□□□ -0.32
Smad1P70340 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smad1P70340 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Smad1P70340 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smad1P70340 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Matn2-203ENSMUST00000226766 3252 ntBASIC13.05□□□□□ -0.32
Smad1P70340 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.05□□□□□ -0.32
Smad1P70340 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Smad1P70340 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smad1P70340 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Gm16202-201ENSMUST00000117532 544 ntBASIC13.05□□□□□ -0.32
Smad1P70340 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Gm16570-201ENSMUST00000161951 436 ntBASIC13.05□□□□□ -0.32
Smad1P70340 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Gm7584-201ENSMUST00000175829 940 ntBASIC13.05□□□□□ -0.32
Smad1P70340 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.05□□□□□ -0.32
Smad1P70340 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.05□□□□□ -0.32
Smad1P70340 Itm2b-204ENSMUST00000228637 783 ntBASIC13.05□□□□□ -0.32
Smad1P70340 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Smad1P70340 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.05□□□□□ -0.32
Smad1P70340 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Smad1P70340 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smad1P70340 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.04□□□□□ -0.32
Smad1P70340 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Gm8213-201ENSMUST00000118191 441 ntBASIC13.04□□□□□ -0.32
Smad1P70340 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Gm6152-201ENSMUST00000151704 340 ntBASIC13.04□□□□□ -0.32
Smad1P70340 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smad1P70340 Gm8810-201ENSMUST00000172895 754 ntBASIC13.04□□□□□ -0.32
Smad1P70340 Gm27501-201ENSMUST00000183599 107 ntBASIC13.04□□□□□ -0.32
Smad1P70340 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smad1P70340 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.04□□□□□ -0.32
Smad1P70340 Gm7783-201ENSMUST00000204795 781 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms