Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.96□□□□□ -0.33
Ybx1P62960 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Ybx1P62960 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Mir874-201ENSMUST00000104769 76 ntBASIC12.96□□□□□ -0.33
Ybx1P62960 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Gm13296-201ENSMUST00000117854 997 ntBASIC12.96□□□□□ -0.33
Ybx1P62960 Gm11331-201ENSMUST00000119764 288 ntBASIC12.96□□□□□ -0.33
Ybx1P62960 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.96□□□□□ -0.33
Ybx1P62960 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.96□□□□□ -0.33
Ybx1P62960 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.96□□□□□ -0.33
Ybx1P62960 Gm24749-201ENSMUST00000157838 343 ntBASIC12.96□□□□□ -0.33
Ybx1P62960 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.96□□□□□ -0.33
Ybx1P62960 Gm5070-201ENSMUST00000177599 862 ntBASIC12.96□□□□□ -0.33
Ybx1P62960 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.96□□□□□ -0.33
Ybx1P62960 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.96□□□□□ -0.33
Ybx1P62960 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.96□□□□□ -0.33
Ybx1P62960 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ybx1P62960 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ybx1P62960 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.96□□□□□ -0.34
Ybx1P62960 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ybx1P62960 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ybx1P62960 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.96□□□□□ -0.34
Ybx1P62960 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ybx1P62960 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.95□□□□□ -0.34
Ybx1P62960 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ybx1P62960 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ybx1P62960 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.95□□□□□ -0.34
Ybx1P62960 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.95□□□□□ -0.34
Ybx1P62960 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.95□□□□□ -0.34
Ybx1P62960 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Gm6963-201ENSMUST00000147879 379 ntBASIC12.95□□□□□ -0.34
Ybx1P62960 Gm24514-201ENSMUST00000174961 285 ntBASIC12.95□□□□□ -0.34
Ybx1P62960 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Ybx1P62960 Gm27552-201ENSMUST00000183351 62 ntBASIC12.95□□□□□ -0.34
Ybx1P62960 Gm27844-201ENSMUST00000183613 62 ntBASIC12.95□□□□□ -0.34
Ybx1P62960 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.95□□□□□ -0.34
Ybx1P62960 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ybx1P62960 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ybx1P62960 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Ybx1P62960 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ybx1P62960 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.94□□□□□ -0.34
Ybx1P62960 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ybx1P62960 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.94□□□□□ -0.34
Ybx1P62960 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.94□□□□□ -0.34
Ybx1P62960 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.94□□□□□ -0.34
Ybx1P62960 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.94□□□□□ -0.34
Ybx1P62960 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms