Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nub1P54729 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nub1P54729 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.66□□□□□ -0.22
Nub1P54729 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nub1P54729 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.66□□□□□ -0.22
Nub1P54729 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nub1P54729 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Gm37424-201ENSMUST00000191727 561 ntBASIC13.66□□□□□ -0.22
Nub1P54729 AY702102-202ENSMUST00000194651 1173 ntBASIC13.66□□□□□ -0.22
Nub1P54729 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Nub1P54729 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.66□□□□□ -0.22
Nub1P54729 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.66□□□□□ -0.22
Nub1P54729 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.66□□□□□ -0.22
Nub1P54729 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nub1P54729 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Nub1P54729 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.65□□□□□ -0.22
Nub1P54729 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nub1P54729 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nub1P54729 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Gm22018-201ENSMUST00000104357 131 ntBASIC13.65□□□□□ -0.22
Nub1P54729 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.65□□□□□ -0.22
Nub1P54729 Gm14921-201ENSMUST00000118643 908 ntBASIC13.65□□□□□ -0.22
Nub1P54729 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.65□□□□□ -0.22
Nub1P54729 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Gm7809-201ENSMUST00000153199 742 ntBASIC13.65□□□□□ -0.22
Nub1P54729 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.65□□□□□ -0.22
Nub1P54729 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.65□□□□□ -0.22
Nub1P54729 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.65□□□□□ -0.22
Nub1P54729 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.65□□□□□ -0.22
Nub1P54729 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.65□□□□□ -0.22
Nub1P54729 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.65□□□□□ -0.22
Nub1P54729 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.65□□□□□ -0.22
Nub1P54729 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Nub1P54729 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.65□□□□□ -0.22
Nub1P54729 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nub1P54729 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.64□□□□□ -0.23
Nub1P54729 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.64□□□□□ -0.23
Nub1P54729 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nub1P54729 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nub1P54729 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nub1P54729 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms