Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pdx1P52946 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pdx1P52946 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pdx1P52946 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pdx1P52946 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.52□□□□□ -0.41
Pdx1P52946 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdx1P52946 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pdx1P52946 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Gm13492-201ENSMUST00000119772 665 ntBASIC12.51□□□□□ -0.41
Pdx1P52946 Gm11964-201ENSMUST00000120982 444 ntBASIC12.51□□□□□ -0.41
Pdx1P52946 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pdx1P52946 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Gm38158-201ENSMUST00000194617 339 ntBASIC12.51□□□□□ -0.41
Pdx1P52946 Gm43133-201ENSMUST00000197472 463 ntBASIC12.51□□□□□ -0.41
Pdx1P52946 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pdx1P52946 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.51□□□□□ -0.41
Pdx1P52946 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Gm22058-201ENSMUST00000083393 310 ntBASIC12.51□□□□□ -0.41
Pdx1P52946 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pdx1P52946 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.51□□□□□ -0.41
Pdx1P52946 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Pdx1P52946 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pdx1P52946 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdx1P52946 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdx1P52946 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Pdx1P52946 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Gm15703-201ENSMUST00000120250 880 ntBASIC12.5□□□□□ -0.41
Pdx1P52946 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.5□□□□□ -0.41
Pdx1P52946 Gm24548-201ENSMUST00000158650 108 ntBASIC12.5□□□□□ -0.41
Pdx1P52946 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdx1P52946 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.5□□□□□ -0.41
Pdx1P52946 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pdx1P52946 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.5□□□□□ -0.41
Pdx1P52946 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdx1P52946 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdx1P52946 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.5□□□□□ -0.41
Pdx1P52946 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pdx1P52946 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pdx1P52946 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Pdx1P52946 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdx1P52946 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pdx1P52946 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.49□□□□□ -0.41
Pdx1P52946 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.49□□□□□ -0.41
Pdx1P52946 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pdx1P52946 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.49□□□□□ -0.41
Pdx1P52946 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.49□□□□□ -0.41
Pdx1P52946 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Pdx1P52946 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.49□□□□□ -0.41
Pdx1P52946 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.49□□□□□ -0.41
Pdx1P52946 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms