Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.03■□□□□ -0
Ercc3P49135 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.03■□□□□ -0
Ercc3P49135 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ercc3P49135 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ercc3P49135 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.03■□□□□ -0
Ercc3P49135 Gm43321-201ENSMUST00000198897 2409 ntBASIC15.03■□□□□ -0
Ercc3P49135 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ercc3P49135 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ercc3P49135 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ercc3P49135 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ercc3P49135 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ercc3P49135 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.02■□□□□ -0
Ercc3P49135 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Ercc3P49135 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.02■□□□□ -0
Ercc3P49135 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Ercc3P49135 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.02■□□□□ -0
Ercc3P49135 Daam2-202ENSMUST00000224595 1926 ntBASIC15.02■□□□□ -0
Ercc3P49135 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ercc3P49135 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.02■□□□□ -0
Ercc3P49135 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.02■□□□□ -0
Ercc3P49135 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ercc3P49135 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.02■□□□□ -0
Ercc3P49135 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.02■□□□□ -0
Ercc3P49135 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ercc3P49135 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.02■□□□□ -0
Ercc3P49135 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.02■□□□□ -0
Ercc3P49135 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Ercc3P49135 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.02■□□□□ -0
Ercc3P49135 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ercc3P49135 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.02■□□□□ -0
Ercc3P49135 Gm45331-201ENSMUST00000209868 554 ntBASIC15.02■□□□□ -0
Ercc3P49135 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.02■□□□□ -0
Ercc3P49135 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc3P49135 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ercc3P49135 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ercc3P49135 Gm22058-201ENSMUST00000083393 310 ntBASIC15.02■□□□□ -0
Ercc3P49135 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ercc3P49135 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc3P49135 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc3P49135 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc3P49135 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc3P49135 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc3P49135 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.02□□□□□ -0.01
Ercc3P49135 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.02□□□□□ -0.01
Ercc3P49135 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc3P49135 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
Ercc3P49135 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Ercc3P49135 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.02□□□□□ -0.01
Ercc3P49135 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ercc3P49135 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ercc3P49135 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ercc3P49135 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm4986-201ENSMUST00000119731 549 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm16296-201ENSMUST00000159905 325 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Olfr284-202ENSMUST00000206647 966 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm6013-201ENSMUST00000212264 699 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.01□□□□□ -0.01
Ercc3P49135 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ercc3P49135 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms