Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.94□□□□□ -0.18
Brca1P48754 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Gm15744-201ENSMUST00000161734 213 ntBASIC13.94□□□□□ -0.18
Brca1P48754 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Brca1P48754 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Brca1P48754 Gm8956-201ENSMUST00000203939 825 ntBASIC13.94□□□□□ -0.18
Brca1P48754 Gm19091-201ENSMUST00000208120 978 ntBASIC13.94□□□□□ -0.18
Brca1P48754 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.94□□□□□ -0.18
Brca1P48754 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brca1P48754 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Brca1P48754 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Brca1P48754 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.93□□□□□ -0.18
Brca1P48754 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.93□□□□□ -0.18
Brca1P48754 Gm8731-201ENSMUST00000118088 412 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Gm11354-201ENSMUST00000121974 422 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Brca1P48754 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Gm28686-201ENSMUST00000187404 609 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.93□□□□□ -0.18
Brca1P48754 Gm44329-201ENSMUST00000197469 112 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.93□□□□□ -0.18
Brca1P48754 Gm6722-201ENSMUST00000221586 390 ntBASIC13.93□□□□□ -0.18
Brca1P48754 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Gm19009-201ENSMUST00000223072 823 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Brca1P48754 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Brca1P48754 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.93□□□□□ -0.18
Brca1P48754 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Brca1P48754 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Brca1P48754 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brca1P48754 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.93□□□□□ -0.18
Brca1P48754 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Gm13916-201ENSMUST00000117368 628 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.92□□□□□ -0.18
Brca1P48754 Gm13182-201ENSMUST00000122241 312 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Brca1P48754 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Brca1P48754 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Gm1848-201ENSMUST00000120711 789 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.92□□□□□ -0.18
Brca1P48754 Gm3150-201ENSMUST00000166418 204 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.92□□□□□ -0.18
Brca1P48754 Gm2875-201ENSMUST00000211333 360 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Brca1P48754 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Brca1P48754 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.92□□□□□ -0.18
Brca1P48754 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.92□□□□□ -0.18
Brca1P48754 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms