Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gli1P47806 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.37□□□□□ -0.43
Gli1P47806 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.37□□□□□ -0.43
Gli1P47806 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gli1P47806 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.37□□□□□ -0.43
Gli1P47806 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gli1P47806 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Gli1P47806 Gm12384-201ENSMUST00000119228 919 ntBASIC12.37□□□□□ -0.43
Gli1P47806 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Gli1P47806 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.37□□□□□ -0.43
Gli1P47806 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.37□□□□□ -0.43
Gli1P47806 Gm26464-201ENSMUST00000157094 305 ntBASIC12.37□□□□□ -0.43
Gli1P47806 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.37□□□□□ -0.43
Gli1P47806 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.37□□□□□ -0.43
Gli1P47806 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.37□□□□□ -0.43
Gli1P47806 Gm43818-201ENSMUST00000200605 466 ntBASIC12.37□□□□□ -0.43
Gli1P47806 Gm6983-201ENSMUST00000214912 628 ntBASIC12.37□□□□□ -0.43
Gli1P47806 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.37□□□□□ -0.43
Gli1P47806 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gli1P47806 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Gli1P47806 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Gli1P47806 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gli1P47806 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gli1P47806 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gli1P47806 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gli1P47806 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Gli1P47806 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gli1P47806 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.36□□□□□ -0.43
Gli1P47806 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.36□□□□□ -0.43
Gli1P47806 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Gli1P47806 Gm6447-201ENSMUST00000118905 835 ntBASIC12.36□□□□□ -0.43
Gli1P47806 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.36□□□□□ -0.43
Gli1P47806 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Gli1P47806 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Gm24644-201ENSMUST00000157114 139 ntBASIC12.36□□□□□ -0.43
Gli1P47806 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.36□□□□□ -0.43
Gli1P47806 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms