Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.46□□□□□ -0.73
Hist1h1aP43275 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hist1h1aP43275 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.46□□□□□ -0.73
Hist1h1aP43275 Gm6218-201ENSMUST00000219812 628 ntBASIC10.46□□□□□ -0.73
Hist1h1aP43275 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.46□□□□□ -0.73
Hist1h1aP43275 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Hist1h1aP43275 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.46□□□□□ -0.74
Hist1h1aP43275 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.46□□□□□ -0.74
Hist1h1aP43275 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Hist1h1aP43275 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm16202-201ENSMUST00000117532 544 ntBASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm12341-201ENSMUST00000119724 503 ntBASIC10.45□□□□□ -0.74
Hist1h1aP43275 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm44397-201ENSMUST00000195950 113 ntBASIC10.45□□□□□ -0.74
Hist1h1aP43275 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm44855-201ENSMUST00000205725 362 ntBASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm20949-201ENSMUST00000206478 952 ntBASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Gm6983-201ENSMUST00000214912 628 ntBASIC10.45□□□□□ -0.74
Hist1h1aP43275 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.45□□□□□ -0.74
Hist1h1aP43275 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.45□□□□□ -0.74
Hist1h1aP43275 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Hist1h1aP43275 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1aP43275 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Hist1h1aP43275 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1aP43275 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1aP43275 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1aP43275 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1aP43275 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hist1h1aP43275 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Hist1h1aP43275 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms