Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox6P40645 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sox6P40645 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sox6P40645 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.9□□□□□ -0.5
Sox6P40645 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sox6P40645 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sox6P40645 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Sox6P40645 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.9□□□□□ -0.5
Sox6P40645 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox6P40645 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.9□□□□□ -0.5
Sox6P40645 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Sox6P40645 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox6P40645 Mir7221-201ENSMUST00000184009 72 ntBASIC11.9□□□□□ -0.5
Sox6P40645 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.9□□□□□ -0.5
Sox6P40645 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.9□□□□□ -0.5
Sox6P40645 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Sox6P40645 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.9□□□□□ -0.5
Sox6P40645 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sox6P40645 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sox6P40645 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sox6P40645 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Sox6P40645 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sox6P40645 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Sox6P40645 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox6P40645 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Sox6P40645 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox6P40645 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.89□□□□□ -0.51
Sox6P40645 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.89□□□□□ -0.51
Sox6P40645 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.89□□□□□ -0.51
Sox6P40645 Gm5687-201ENSMUST00000118252 640 ntBASIC11.89□□□□□ -0.51
Sox6P40645 Mir1894-201ENSMUST00000122802 81 ntBASIC11.89□□□□□ -0.51
Sox6P40645 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.89□□□□□ -0.51
Sox6P40645 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sox6P40645 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Gm7287-201ENSMUST00000205267 602 ntBASIC11.89□□□□□ -0.51
Sox6P40645 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Sox6P40645 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Sox6P40645 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Gm16372-201ENSMUST00000073088 450 ntBASIC11.89□□□□□ -0.51
Sox6P40645 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.89□□□□□ -0.51
Sox6P40645 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Sox6P40645 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Sox6P40645 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Sox6P40645 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Sox6P40645 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox6P40645 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox6P40645 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.88□□□□□ -0.51
Sox6P40645 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.88□□□□□ -0.51
Sox6P40645 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms