Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Fen1P39749 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fen1P39749 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fen1P39749 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fen1P39749 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.76□□□□□ -0.37
Fen1P39749 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fen1P39749 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fen1P39749 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fen1P39749 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Fen1P39749 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Fen1P39749 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.75□□□□□ -0.37
Fen1P39749 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Fen1P39749 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.75□□□□□ -0.37
Fen1P39749 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Fen1P39749 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Fen1P39749 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.75□□□□□ -0.37
Fen1P39749 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.75□□□□□ -0.37
Fen1P39749 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.75□□□□□ -0.37
Fen1P39749 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.75□□□□□ -0.37
Fen1P39749 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Fen1P39749 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.75□□□□□ -0.37
Fen1P39749 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fen1P39749 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Fen1P39749 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.74□□□□□ -0.37
Fen1P39749 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.74□□□□□ -0.37
Fen1P39749 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Fen1P39749 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Fen1P39749 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.74□□□□□ -0.37
Fen1P39749 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.74□□□□□ -0.37
Fen1P39749 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Fen1P39749 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.74□□□□□ -0.37
Fen1P39749 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.74□□□□□ -0.37
Fen1P39749 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fen1P39749 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.73□□□□□ -0.37
Fen1P39749 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Fen1P39749 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.73□□□□□ -0.37
Fen1P39749 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.73□□□□□ -0.37
Fen1P39749 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Fen1P39749 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.73□□□□□ -0.37
Fen1P39749 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.73□□□□□ -0.37
Fen1P39749 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Gm21854-201ENSMUST00000179901 471 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms