Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LdlrP35951 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LdlrP35951 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.61□□□□□ -0.39
LdlrP35951 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.61□□□□□ -0.39
LdlrP35951 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Gm14350-201ENSMUST00000116642 640 ntBASIC12.61□□□□□ -0.39
LdlrP35951 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.61□□□□□ -0.39
LdlrP35951 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LdlrP35951 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.61□□□□□ -0.39
LdlrP35951 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LdlrP35951 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LdlrP35951 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
LdlrP35951 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LdlrP35951 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LdlrP35951 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LdlrP35951 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
LdlrP35951 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LdlrP35951 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.6□□□□□ -0.39
LdlrP35951 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.6□□□□□ -0.39
LdlrP35951 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Gm23931-201ENSMUST00000103842 109 ntBASIC12.6□□□□□ -0.39
LdlrP35951 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.6□□□□□ -0.39
LdlrP35951 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.6□□□□□ -0.39
LdlrP35951 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.6□□□□□ -0.39
LdlrP35951 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.6□□□□□ -0.39
LdlrP35951 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.6□□□□□ -0.39
LdlrP35951 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.6□□□□□ -0.39
LdlrP35951 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.6□□□□□ -0.39
LdlrP35951 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LdlrP35951 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
LdlrP35951 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LdlrP35951 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LdlrP35951 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.59□□□□□ -0.39
LdlrP35951 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.59□□□□□ -0.39
LdlrP35951 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LdlrP35951 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.59□□□□□ -0.39
LdlrP35951 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.59□□□□□ -0.39
LdlrP35951 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LdlrP35951 Gm5187-201ENSMUST00000117317 991 ntBASIC12.59□□□□□ -0.39
LdlrP35951 Gm12384-201ENSMUST00000119228 919 ntBASIC12.59□□□□□ -0.39
LdlrP35951 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.59□□□□□ -0.39
LdlrP35951 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.59□□□□□ -0.39
LdlrP35951 Gm27514-201ENSMUST00000183692 110 ntBASIC12.59□□□□□ -0.39
LdlrP35951 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.59□□□□□ -0.39
LdlrP35951 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.59□□□□□ -0.39
LdlrP35951 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.59□□□□□ -0.39
LdlrP35951 Gm26035-201ENSMUST00000083065 308 ntBASIC12.59□□□□□ -0.39
LdlrP35951 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms