Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Nedd8P29595 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.66□□□□□ -0.54
Nedd8P29595 Gm17271-201ENSMUST00000165535 355 ntBASIC11.66□□□□□ -0.54
Nedd8P29595 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nedd8P29595 Mir7071-201ENSMUST00000184847 69 ntBASIC11.66□□□□□ -0.54
Nedd8P29595 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.66□□□□□ -0.54
Nedd8P29595 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.66□□□□□ -0.54
Nedd8P29595 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.66□□□□□ -0.54
Nedd8P29595 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nedd8P29595 Gm26035-201ENSMUST00000083065 308 ntBASIC11.66□□□□□ -0.54
Nedd8P29595 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nedd8P29595 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nedd8P29595 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.66□□□□□ -0.54
Nedd8P29595 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nedd8P29595 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.65□□□□□ -0.54
Nedd8P29595 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.65□□□□□ -0.54
Nedd8P29595 Mir1897-201ENSMUST00000122581 272 ntBASIC11.65□□□□□ -0.54
Nedd8P29595 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nedd8P29595 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.65□□□□□ -0.54
Nedd8P29595 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nedd8P29595 Gm27772-201ENSMUST00000184900 187 ntBASIC11.65□□□□□ -0.54
Nedd8P29595 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.65□□□□□ -0.54
Nedd8P29595 Gm29541-201ENSMUST00000191351 678 ntBASIC11.65□□□□□ -0.54
Nedd8P29595 Gm8227-201ENSMUST00000223306 571 ntBASIC11.65□□□□□ -0.54
Nedd8P29595 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.65□□□□□ -0.54
Nedd8P29595 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nedd8P29595 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
Nedd8P29595 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Nedd8P29595 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nedd8P29595 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nedd8P29595 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Nedd8P29595 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Gm24543-201ENSMUST00000103867 82 ntBASIC11.64□□□□□ -0.55
Nedd8P29595 Gm11745-201ENSMUST00000121669 448 ntBASIC11.64□□□□□ -0.55
Nedd8P29595 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.64□□□□□ -0.55
Nedd8P29595 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.64□□□□□ -0.55
Nedd8P29595 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Nedd8P29595 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.64□□□□□ -0.55
Nedd8P29595 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nedd8P29595 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms