Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.61□□□□□ -0.71
Tnfrsf1aP25118 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm14704-201ENSMUST00000120300 874 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm27486-201ENSMUST00000184923 80 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm27892-201ENSMUST00000185017 106 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Mir339-201ENSMUST00000083659 96 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tnfrsf1aP25118 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Gm14921-201ENSMUST00000118643 908 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Gm13369-201ENSMUST00000119442 987 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Gm11803-201ENSMUST00000119966 444 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Gm15806-201ENSMUST00000120696 955 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Gm16479-201ENSMUST00000121706 932 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Gm17208-201ENSMUST00000168388 535 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Gm23363-201ENSMUST00000175024 79 ntBASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1aP25118 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms