Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm23270-201ENSMUST00000104055 131 ntBASIC13.85□□□□□ -0.19
Pde6bP23440 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.85□□□□□ -0.19
Pde6bP23440 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.85□□□□□ -0.19
Pde6bP23440 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.85□□□□□ -0.19
Pde6bP23440 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.85□□□□□ -0.19
Pde6bP23440 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm5950-201ENSMUST00000213337 772 ntBASIC13.85□□□□□ -0.19
Pde6bP23440 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.85□□□□□ -0.19
Pde6bP23440 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pde6bP23440 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.85□□□□□ -0.19
Pde6bP23440 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.85□□□□□ -0.19
Pde6bP23440 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pde6bP23440 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.84□□□□□ -0.19
Pde6bP23440 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.84□□□□□ -0.19
Pde6bP23440 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.84□□□□□ -0.19
Pde6bP23440 Gm14017-201ENSMUST00000121934 386 ntBASIC13.84□□□□□ -0.19
Pde6bP23440 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Gm15276-201ENSMUST00000145953 498 ntBASIC13.84□□□□□ -0.19
Pde6bP23440 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.84□□□□□ -0.19
Pde6bP23440 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.84□□□□□ -0.19
Pde6bP23440 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.84□□□□□ -0.19
Pde6bP23440 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.84□□□□□ -0.19
Pde6bP23440 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.84□□□□□ -0.19
Pde6bP23440 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.84□□□□□ -0.19
Pde6bP23440 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.84□□□□□ -0.19
Pde6bP23440 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.84□□□□□ -0.19
Pde6bP23440 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Pde6bP23440 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pde6bP23440 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Pde6bP23440 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pde6bP23440 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Pde6bP23440 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pde6bP23440 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pde6bP23440 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pde6bP23440 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pde6bP23440 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.83□□□□□ -0.2
Pde6bP23440 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pde6bP23440 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.83□□□□□ -0.2
Pde6bP23440 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms