Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.88□□□□□ -0.51
Clk1P22518 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clk1P22518 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.88□□□□□ -0.51
Clk1P22518 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.88□□□□□ -0.51
Clk1P22518 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.88□□□□□ -0.51
Clk1P22518 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clk1P22518 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.88□□□□□ -0.51
Clk1P22518 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Clk1P22518 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.88□□□□□ -0.51
Clk1P22518 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.88□□□□□ -0.51
Clk1P22518 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clk1P22518 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.88□□□□□ -0.51
Clk1P22518 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.88□□□□□ -0.51
Clk1P22518 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.88□□□□□ -0.51
Clk1P22518 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clk1P22518 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clk1P22518 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.88□□□□□ -0.51
Clk1P22518 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Clk1P22518 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clk1P22518 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.88□□□□□ -0.51
Clk1P22518 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.88□□□□□ -0.51
Clk1P22518 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
Clk1P22518 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.87□□□□□ -0.51
Clk1P22518 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.87□□□□□ -0.51
Clk1P22518 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.87□□□□□ -0.51
Clk1P22518 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.87□□□□□ -0.51
Clk1P22518 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.87□□□□□ -0.51
Clk1P22518 Gm12138-201ENSMUST00000122180 951 ntBASIC11.87□□□□□ -0.51
Clk1P22518 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.87□□□□□ -0.51
Clk1P22518 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.87□□□□□ -0.51
Clk1P22518 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.87□□□□□ -0.51
Clk1P22518 Gm37922-201ENSMUST00000195596 455 ntBASIC11.87□□□□□ -0.51
Clk1P22518 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.87□□□□□ -0.51
Clk1P22518 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.87□□□□□ -0.51
Clk1P22518 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.87□□□□□ -0.51
Clk1P22518 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.87□□□□□ -0.51
Clk1P22518 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Clk1P22518 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clk1P22518 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clk1P22518 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.86□□□□□ -0.51
Clk1P22518 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clk1P22518 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms